GO:0006886


GO:0006886

intracellular protein transport
(annotated genes)

Biological
Process

Parent node

This leaf node contains 212 genes

The following 45 of these are used in classification:

 SymbolGenenameADENO scoreother score
33402_atKDELR3 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 30.1423-0.3092
38849_atSCAMP1 secretory carrier membrane protein 1-0.140.3042
36972_atRNP24 coated vesicle membrane protein0.1309-0.2844
39795_atAP2M1 adaptor-related protein complex 2, mu 1 subunit-0.10910.237
36660_atRAB11A RAB11A, member RAS oncogene family-0.10340.2247
38635_atSSR4 signal sequence receptor, delta (translocon-associated protein delta)0.0852-0.185
34199_atSEC24A SEC24 related gene family, member A (S. cerevisiae)0.0816-0.1771
36955_atLMAN2 lectin, mannose-binding 20.0784-0.1702
32487_s_atKPNA4 karyopherin alpha 4 (importin alpha 3)0.0776-0.1685
38937_atAP3B2 adaptor-related protein complex 3, beta 2 subunit-0.06810.148
39134_atTOM1 target of myb1 (chicken)0.0677-0.1471
36049_atRAB6B RAB6B, member RAS oncogene family-0.06180.1342
41724_atBCAP31 B-cell receptor-associated protein 310.0564-0.1224
39080_atKDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 20.0524-0.1138
35325_atRAB14 RAB14, member RAS oncogene family-0.04860.1056
32290_atSCAMP1 secretory carrier membrane protein 1-0.04580.0995
33942_s_atSTXBP1 syntaxin binding protein 1-0.04210.0915
32523_atCLTB clathrin, light polypeptide (Lcb)-0.04010.0871
40931_atCGI-100 CGI-100 protein0.0375-0.0815
33423_g_atSEC13L1 SEC13-like 1 (S. cerevisiae)0.0375-0.0814
624_atRAB3B RAB3B, member RAS oncogene family-0.0370.0804
33349_atTNPO1 transportin 1-0.03350.0728
41549_s_atAP1S2 adaptor-related protein complex 1, sigma 2 subunit-0.03320.072
41163_atP24B integral type I protein0.0324-0.0705
1074_atRAB1A RAB1A, member RAS oncogene family0.0324-0.0704
33877_s_atEXOC7 exocyst complex component 70.0292-0.0633
34895_atSEC23IP SEC23 interacting protein0.0289-0.0628
33434_atBET1 BET1 homolog (S. cerevisiae)0.0283-0.0614
39099_atSEC23A Sec23 homolog A (S. cerevisiae)0.0247-0.0537
36977_atNAPA N-ethylmaleimide-sensitive factor attachment protein, alpha-0.02430.0527
40275_atKPNA6 karyopherin alpha 6 (importin alpha 7)-0.02190.0475
37237_atAP3M2 adaptor-related protein complex 3, mu 2 subunit-0.02140.0464
32522_f_atCLTB clathrin, light polypeptide (Lcb)-0.01350.0292
32770_atSEC24D SEC24 related gene family, member D (S. cerevisiae)0.0133-0.0289
34326_atCOPB coatomer protein complex, subunit beta0.0131-0.0284
33422_atSEC13L1 SEC13-like 1 (S. cerevisiae)0.009-0.0196
31654_atSORCS3 VPS10 domain receptor protein SORCS 3-0.0090.0195
41001_atRPH3A rabphilin 3A homolog (mouse)-0.00890.0193
33887_atHGS hepatocyte growth factor-regulated tyrosine kinase substrate0.0078-0.0169
34392_s_atRAB1A RAB1A, member RAS oncogene family0.0075-0.0163
38719_atNSF N-ethylmaleimide-sensitive factor-0.00580.0127
37911_atSTX4A syntaxin 4A (placental)0.0048-0.0105
38164_atRPGR retinitis pigmentosa GTPase regulator-0.00230.0051
34836_atRAB5C RAB5C, member RAS oncogene family0.002-0.0043
40824_atXPO7 exportin 7-0.00120.0025

Performance on training data

 SensitivitySpecificity
ADENO0.985610.75
other0.750.98561

Performance on test data

 SensitivitySpecificity
ADENO0.985610.75
other0.750.98561

Predictions

 ClassADENOotherPredictionn
CL2001031606AA (testset)other0.648230.35177 ADENO
CL2001031607AA (testset)other0.362790.63721 other
CL2001031608AA (testset)ADENO0.690810.30919 ADENO
CL2001031609AA (testset)other0.011140.98886 other
CL2001031611AA (testset)ADENO0.938480.06152 ADENO
CL2001031612AA (testset)ADENO0.897910.10209 ADENO
CL2001031613AA (testset)ADENO0.97390.0261 ADENO
CL2001031615AA (testset)ADENO0.543930.45607 ADENO
CL2001031616AA (testset)ADENO0.949460.05054 ADENO
CL2001031618AA (testset)ADENO0.676560.32344 ADENO
CL2001031620AA (testset)other0.596960.40304 ADENO
CL2001031621AA (testset)other0.499010.50099 other
CL2001031622AA (testset)ADENO0.703850.29615 ADENO
CL2001031625AA (testset)ADENO0.948720.05128 ADENO
CL2001031627AA (testset)ADENO0.87170.1283 ADENO
CL2001031628AA (testset)ADENO0.964490.03551 ADENO
CL2001031629AA (testset)ADENO0.855920.14408 ADENO
CL2001031630AA (testset)ADENO0.944870.05513 ADENO
CL2001031631AA (testset)ADENO0.935380.06462 ADENO
CL2001031632AA (testset)ADENO0.880710.11929 ADENO
CL2001031634AA (testset)ADENO0.722840.27716 ADENO
CL2001031635AA (testset)ADENO0.966020.03398 ADENO
CL2001031636AA (testset)ADENO0.946660.05334 ADENO
CL2001032002AA (testset)ADENO0.794910.20509 ADENO
CL2001032005AA (testset)ADENO0.866760.13324 ADENO
CL2001032008AA (testset)ADENO0.955550.04445 ADENO
CL2001032009AA (testset)ADENO0.956420.04358 ADENO
CL2001032010AA (testset)other0.476180.52382 other
CL2001032011AA (testset)ADENO0.877070.12293 ADENO
CL2001032012AA (testset)ADENO0.808510.19149 ADENO
CL2001032013AA (testset)ADENO0.920390.07961 ADENO
CL2001032015AA (testset)ADENO0.942690.05731 ADENO
CL2001032016AA (testset)ADENO0.960790.03921 ADENO
CL2001032019AA (testset)ADENO0.985740.01426 ADENO
CL2001032020AA (testset)ADENO0.957570.04243 ADENO
CL2001032025AA (testset)ADENO0.660370.33963 ADENO
CL2001032026AA (testset)ADENO0.812150.18785 ADENO
CL2001032027AA (testset)ADENO0.902180.09782 ADENO
CL2001032030AA (testset)ADENO0.961860.03814 ADENO
CL2001032031AA (testset)ADENO0.860050.13995 ADENO
CL2001032032AA (testset)ADENO0.577440.42256 ADENO
CL2001032034AA (testset)ADENO0.749160.25084 ADENO
CL2001032036AA (testset)ADENO0.678460.32154 ADENO
CL2001032041AA (testset)other0.378430.62157 other
CL2001032043AA (testset)other0.344870.65513 other
CL2001032044AA (testset)other0.017230.98277 other
CL2001032045AA (testset)other0.24050.7595 other
CL2001032046AA (testset)other0.261550.73845 other
CL2001032101AA (testset)other0.029530.97047 other
CL2001032102AA (testset)other0.321240.67876 other
CL2001032103AA (testset)ADENO0.834960.16504 ADENO
CL2001032104AA (testset)ADENO0.814710.18529 ADENO
CL2001032105AA (testset)ADENO0.849930.15007 ADENO
CL2001032107AA (testset)ADENO0.983010.01699 ADENO
CL2001032108AA (testset)ADENO0.860170.13983 ADENO
CL2001032109AA (testset)ADENO0.870220.12978 ADENO
CL2001032110AA (testset)ADENO0.943410.05659 ADENO
CL2001032111AA (testset)ADENO0.921350.07865 ADENO
CL2001032113AA (testset)ADENO0.702560.29744 ADENO
CL2001032114AA (testset)ADENO0.846570.15343 ADENO
CL2001032115AA (testset)ADENO0.84250.1575 ADENO
CL2001032116AA (testset)ADENO0.851360.14864 ADENO
CL2001032117AA (testset)ADENO0.933160.06684 ADENO
CL2001032121AA (testset)other0.160910.83909 other
CL2001032122AA (testset)other0.482390.51761 other
CL2001032124AA (testset)other0.045070.95493 other
CL2001032125AA (testset)ADENO0.91250.0875 ADENO
CL2001032127AA (testset)other0.02330.9767 other
CL2001032128AA (testset)other0.628740.37126 ADENO
CL2001032129AA (testset)other0.627350.37265 ADENO
CL2001032130AA (testset)ADENO0.958330.04167 ADENO
CL2001032132AA (testset)ADENO0.938850.06115 ADENO
CL2001032134AA (testset)ADENO0.87020.1298 ADENO
CL2001032135AA (testset)ADENO0.889050.11095 ADENO
CL2001032136AA (testset)ADENO0.829890.17011 ADENO
CL2001032138AA (testset)ADENO0.742410.25759 ADENO
CL2001032141AA (testset)ADENO0.902720.09728 ADENO
CL2001032142AA (testset)ADENO0.390210.60979 other
CL2001032144AA (testset)other0.681980.31802 ADENO
CL2001032145AA (testset)other0.036690.96331 other
CL2001032147AA (testset)other0.408370.59163 other
CL2001032149AA (testset)ADENO0.855690.14431 ADENO
CL2001032151AA (testset)other0.03330.9667 other
CL2001032152AA (testset)other0.022170.97783 other
CL2001032153AA (testset)other0.272270.72773 other
CL2001032155AA (testset)ADENO0.908140.09186 ADENO
CL2001032156AA (testset)ADENO0.823950.17605 ADENO
CL2001032202AA (testset)other0.213470.78653 other
CL2001032206AA (testset)other0.565980.43402 ADENO
CL2001032207AA (testset)other0.288910.71109 other
CL2001032209AA (testset)other0.344710.65529 other
CL2001032210AA (testset)other0.031450.96855 other
CL2001032211AA (testset)ADENO0.956910.04309 ADENO
CL2001032212AA (testset)ADENO0.852510.14749 ADENO
CL2001032213AA (testset)ADENO0.920930.07907 ADENO
CL2001032214AA (testset)ADENO0.832960.16704 ADENO
CL2001032217AA (testset)other0.102830.89717 other
CL2001032218AA (testset)other0.541010.45899 ADENO
CL2001032219AA (testset)other0.024590.97541 other
CL2001032220AA (testset)other0.215020.78498 other
CL2001032222AA (testset)other0.821110.17889 ADENO
CL2001032229AA (testset)ADENO0.830160.16984 ADENO
CL2001032231AA (testset)other0.677930.32207 ADENO
CL2001032232AA (testset)ADENO0.975180.02482 ADENO
CL2001032233AA (testset)ADENO0.9550.045 ADENO
CL2001032238AA (testset)other0.066670.93333 other
CL2001032239AA (testset)other0.664950.33505 ADENO
CL2001032240AA (testset)other0.456090.54391 other
CL2001032241AA (testset)ADENO0.95540.0446 ADENO
CL2001032242AA (testset)ADENO0.979210.02079 ADENO
CL2001032243AA (testset)ADENO0.972840.02716 ADENO
CL2001032248AA (testset)ADENO0.971490.02851 ADENO
CL2001032249AA (testset)ADENO0.952180.04782 ADENO
CL2001032252AA (testset)ADENO0.983440.01656 ADENO
CL2001032254AA (testset)ADENO0.908290.09171 ADENO
CL2001032255AA (testset)ADENO0.968550.03145 ADENO
CL2001032256AA (testset)other0.9240.076 ADENO
CL2001032259AA (testset)ADENO0.965010.03499 ADENO
CL2001032260AA (testset)other0.138320.86168 other
CL2001032301AA (testset)ADENO0.875140.12486 ADENO
CL2001032304AA (testset)other0.663710.33629 ADENO
CL2001032305AA (testset)other0.577310.42269 ADENO
CL2001032306AA (testset)ADENO0.919540.08046 ADENO
CL2001032307AA (testset)ADENO0.70950.2905 ADENO
CL2001032308AA (testset)ADENO0.85260.1474 ADENO
CL2001032309AA (testset)ADENO0.569370.43063 ADENO
CL2001032310AA (testset)ADENO0.537880.46212 ADENO
CL2001032311AA (testset)ADENO0.905940.09406 ADENO
CL2001032312AA (testset)ADENO0.843720.15628 ADENO
CL2001032313AA (testset)ADENO0.931750.06825 ADENO
CL2001032314AA (testset)ADENO0.949890.05011 ADENO
CL2001032316AA (testset)ADENO0.844480.15552 ADENO
CL2001032601AA (testset)ADENO0.840660.15934 ADENO
CL2001032602AA (testset)ADENO0.97350.0265 ADENO
CL2001032604AA (testset)ADENO0.883870.11613 ADENO
CL2001032607AA (testset)other0.026730.97327 other
CL2001032608AA (testset)other0.470010.52999 other
CL2001032610AA (testset)ADENO0.80590.1941 ADENO
CL2001032612AA (testset)ADENO0.526950.47305 ADENO
CL2001032613AA (testset)ADENO0.956960.04304 ADENO
CL2001032614AA (testset)ADENO0.942930.05707 ADENO
CL2001032616AA (testset)ADENO0.552440.44756 ADENO
CL2001032617AA (testset)ADENO0.909810.09019 ADENO
CL2001032620AA (testset)ADENO0.692040.30796 ADENO
CL2001032625AA (testset)ADENO0.696750.30325 ADENO
CL2001032627AA (testset)other0.696980.30302 ADENO
CL2001032628AA (testset)ADENO0.848080.15192 ADENO
CL2001032629AA (testset)other0.014430.98557 other
CL2001032630AA (testset)other0.06410.9359 other
CL2001032632AA (testset)other0.226430.77357 other
CL2001032638AA (testset)ADENO0.843560.15644 ADENO
CL2001032640AA (testset)ADENO0.97050.0295 ADENO
CL2001032643AA (testset)ADENO0.990.01 ADENO
CL2001032644AA (testset)other0.457420.54258 other
CL2001032647AA (testset)ADENO0.681160.31884 ADENO
CL2001032701AA (testset)ADENO0.83270.1673 ADENO
CL2001032702AA (testset)ADENO0.974690.02531 ADENO
CL2001032703AA (testset)ADENO0.926520.07348 ADENO
CL2001032704AA (testset)ADENO0.96920.0308 ADENO
CL2001032706AA (testset)ADENO0.928920.07108 ADENO
CL2001032709AA (testset)ADENO0.966420.03358 ADENO
CL2001032716AA (testset)ADENO0.857750.14225 ADENO
CL2001032717AA (testset)ADENO0.726620.27338 ADENO
CL2001032718AA (testset)other0.466920.53308 other
CL2001032719AA (testset)other0.677210.32279 ADENO
CL2001032720AA (testset)other0.025060.97494 other
CL2001032722AA (testset)other0.014550.98545 other
CL2001032724AA (testset)other0.7450.255 ADENO
CL2001032725AA (testset)other0.191790.80821 other
CL2001032727AA (testset)other0.221060.77894 other
CL2001032729AA (testset)ADENO0.750620.24938 ADENO
CL2001032730AA (testset)ADENO0.970270.02973 ADENO
CL2001032732AA (testset)other0.380350.61965 other
CL2001032733AA (testset)ADENO0.910370.08963 ADENO
CL2001032738AA (testset)ADENO0.824370.17563 ADENO
CL2001032742AA (testset)ADENO0.608960.39104 ADENO
CL2001032746AA (testset)ADENO0.93170.0683 ADENO
CL2001032747AA (testset)ADENO0.932240.06776 ADENO
CL2001032833AA (testset)ADENO0.448580.55142 other
CL2001032836AA (testset)ADENO0.976530.02347 ADENO
CL2001032838AA (testset)ADENO0.969920.03008 ADENO
CL2001032839AA (testset)ADENO0.700270.29973 ADENO
CL2001032841AA (testset)ADENO0.827980.17202 ADENO
CL2001032842AA (testset)ADENO0.922580.07742 ADENO
CL2001032843AA (testset)ADENO0.972630.02737 ADENO
CL2001032845AA (testset)ADENO0.913270.08673 ADENO
CL2001032846AA (testset)ADENO0.962810.03719 ADENO
CL2001032847AA (testset)other0.093170.90683 other
CL2001032848AA (testset)ADENO0.608840.39116 ADENO
CL2001032850AA (testset)other0.007790.99221 other
CL2001032853AA (testset)other0.456670.54333 other
CL2001032854AA (testset)other0.06030.9397 other
CL2001032856AA (testset)ADENO0.913730.08627 ADENO
CL2001032857AA (testset)ADENO0.846330.15367 ADENO
CL2001032860AA (testset)other0.020290.97971 other
CL2001040305AA (testset)ADENO0.811410.18859 ADENO
CL2001040306AA (testset)ADENO0.923150.07685 ADENO
CL2001041708AA (testset)ADENO0.90680.0932 ADENO
CL2001041711AA (testset)ADENO0.851710.14829 ADENO
CL2001041716AA (testset)ADENO0.847240.15276 ADENO
CL2001042501AA (testset)other0.015940.98406 other
CL2001042505AA (testset)ADENO0.775280.22472 ADENO
CL2001042506AA (testset)ADENO0.817470.18253 ADENO

 


Generated by StAM on Tue Sep 7 18:09:39 2004