GO:0007601 | vision | Biological Process |
| GO:0007601 | vision |
|---|
The following 38 of these are used in classification:
| Symbol | Genename | not.recurred score | recurred score | |
|---|---|---|---|---|
| 36346_at | RGR | retinal G protein coupled receptor | -0.1865 | 0.3523 |
| 41041_s_at | MYO7A | myosin VIIA (Usher syndrome 1B (autosomal recessive, severe)) | -0.1681 | 0.3175 |
| 39053_at | PRPF3 | PRP3 pre-mRNA processing factor 3 homolog (yeast) | -0.1408 | 0.2659 |
| 34490_f_at | FSCN2 | fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) | -0.1396 | 0.2638 |
| 40782_at | DHRS3 | dehydrogenase/reductase (SDR family) member 3 | -0.1185 | 0.2238 |
| 35164_at | WFS1 | Wolfram syndrome 1 (wolframin) | -0.0811 | 0.1532 |
| 34148_at | SIX3 | sine oculis homeobox homolog 3 (Drosophila) | 0.081 | -0.153 |
| 31970_r_at | PPEF2 | protein phosphatase, EF hand calcium-binding domain 2 | 0.0795 | -0.1501 |
| 31366_at | NR2E3 | nuclear receptor subfamily 2, group E, member 3 | -0.0752 | 0.142 |
| 41286_at | TACSTD2 | tumor-associated calcium signal transducer 2 | 0.0737 | -0.1392 |
| 111_at | RABGGTA | Rab geranylgeranyltransferase, alpha subunit | -0.0734 | 0.1387 |
| 38928_r_at | TYR | tyrosinase (oculocutaneous albinism IA) | 0.0672 | -0.1269 |
| 33313_g_at | CRYAA | crystallin, alpha A | -0.0649 | 0.1226 |
| 36023_at | PROL4 | proline rich 4 (lacrimal) | -0.0574 | 0.1084 |
| 32875_at | RHO | rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) | 0.0552 | -0.1043 |
| 40948_at | ROM1 | retinal outer segment membrane protein 1 | -0.0547 | 0.1033 |
| 36044_at | PDE6D | phosphodiesterase 6D, cGMP-specific, rod, delta | -0.0533 | 0.1006 |
| 37902_at | CRYZ | crystallin, zeta (quinone reductase) | 0.0527 | -0.0995 |
| 34571_at | GNAT2 | guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 | 0.0523 | -0.0987 |
| 31408_at | RRH | retinal pigment epithelium-derived rhodopsin homolog | 0.0466 | -0.088 |
| 38107_at | UNC119 | unc-119 homolog (C. elegans) | -0.0429 | 0.081 |
| 34069_s_at | SSX2 | synovial sarcoma, X breakpoint 2 | -0.042 | 0.0793 |
| 41671_at | EML1 | echinoderm microtubule associated protein like 1 | -0.0304 | 0.0573 |
| 37847_at | USH1C | Usher syndrome 1C (autosomal recessive, severe) | 0.0297 | -0.056 |
| 37653_at | COL18A1 | collagen, type XVIII, alpha 1 | -0.0287 | 0.0542 |
| 1034_at | TIMP3 | tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory) | -0.0253 | 0.0478 |
| 964_at | ABCC6 | ATP-binding cassette, sub-family C (CFTR/MRP), member 6 | -0.0249 | 0.0471 |
| 32876_s_at | RHO | rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) | -0.0245 | 0.0463 |
| 100_g_at | RABGGTA | Rab geranylgeranyltransferase, alpha subunit | -0.023 | 0.0434 |
| 32458_f_at | PRB4 | proline-rich protein BstNI subfamily 4 | 0.0189 | -0.0356 |
| 126_s_at | SSX2 | synovial sarcoma, X breakpoint 2 | -0.0181 | 0.0342 |
| 37703_at | RABGGTB | Rab geranylgeranyltransferase, beta subunit | -0.0177 | 0.0335 |
| 38498_at | CRYBB3 | crystallin, beta B3 | -0.017 | 0.0321 |
| 32457_f_at | PRB4 | proline-rich protein BstNI subfamily 4 | 0.0161 | -0.0304 |
| 32551_at | EFEMP1 | EGF-containing fibulin-like extracellular matrix protein 1 | -0.0145 | 0.0274 |
| 38038_at | LUM | lumican | 0.0097 | -0.0182 |
| 40703_at | RBP3 | retinol binding protein 3, interstitial | -0.0057 | 0.0108 |
| 32278_at | CHML | choroideremia-like (Rab escort protein 2) | 6e-04 | -0.0011 |
| Sensitivity | Specificity | |
|---|---|---|
| not.recurred | 0.88235 | 0.72222 |
| recurred | 0.72222 | 0.88235 |
| Sensitivity | Specificity | |
|---|---|---|
| not.recurred | 0.88235 | 0.72222 |
| recurred | 0.72222 | 0.88235 |
| Class | not.recurred | recurred | Predictionn | |
|---|---|---|---|---|
| 0029_1222_H95A2_KF0146 (testset) | recurred | 0.64592 | 0.35408 | not.recurred |
| 0029_1224_HU95A_KF0150 (testset) | recurred | 0.47698 | 0.52302 | recurred |
| 0029_1237_H95A2_KF0125 (testset) | not.recurred | 0.74916 | 0.25084 | not.recurred |
| 0029_1238_H95A2_KF0128 (testset) | recurred | 0.12967 | 0.87033 | recurred |
| 0029_1239_H95A2_KF0131 (testset) | recurred | 0.22238 | 0.77762 | recurred |
| 0029_1240_H95A2_KF0133 (testset) | recurred | 0.20312 | 0.79688 | recurred |
| 0029_1241_H95A2_KF0142 (testset) | recurred | 0.45096 | 0.54904 | recurred |
| 0029_1242_H95A2_KF0149 (testset) | recurred | 0.53493 | 0.46507 | not.recurred |
| 0029_1243_H95A2_KF0154 (testset) | recurred | 0.0693 | 0.9307 | recurred |
| 0029_1244_H95A2_KF0153 (testset) | recurred | 0.2313 | 0.7687 | recurred |
| 0029_1245_H95A2_KF0140 (testset) | recurred | 0.04169 | 0.95831 | recurred |
| 0029_1246_H95A2_KF0139 (testset) | not.recurred | 0.14798 | 0.85202 | recurred |
| 0029_1247_H95A2_KF0138 (testset) | recurred | 0.00795 | 0.99205 | recurred |
| 0029_1248_H95A2_KF0135 (testset) | recurred | 0.03538 | 0.96462 | recurred |
| 0029_1249_H95A2_KF0134 (testset) | recurred | 0.02135 | 0.97865 | recurred |
| 0029_1250_H95A2_KF0129 (testset) | not.recurred | 0.9185 | 0.0815 | not.recurred |
| 0029_1344_H95A2_KF-188 (testset) | recurred | 0.91465 | 0.08535 | not.recurred |
| 0029_1353_H95A2_KF-176 (testset) | recurred | 0.76878 | 0.23122 | not.recurred |
| 0029_1355_H95A2_KF-182 (testset) | not.recurred | 0.90623 | 0.09377 | not.recurred |
| 0029_1357_H95A2_KF-187 (testset) | recurred | 0.67732 | 0.32268 | not.recurred |
| 0029_1397_H95A2_KF-207 (testset) | not.recurred | 0.1584 | 0.8416 | recurred |
| 0029_1398_H95A2_KF-193 (testset) | recurred | 0.3718 | 0.6282 | recurred |
| 0029_1399_H95A2_KF-200 (testset) | recurred | 0.23838 | 0.76162 | recurred |
| 0029_1425_H95A2_T96-159 (testset) | not.recurred | 0.76821 | 0.23179 | not.recurred |
| 0029_1426_H95A2_T96-167 (testset) | not.recurred | 0.97886 | 0.02114 | not.recurred |
| 0029_1427_H95A2_T96-195 (testset) | not.recurred | 0.94516 | 0.05484 | not.recurred |
| 0029_1428_H95A2_T96-250 (testset) | not.recurred | 0.95771 | 0.04229 | not.recurred |
| 0029_1429_H95A2_T97-017 (testset) | not.recurred | 0.91956 | 0.08044 | not.recurred |
| 0029_1430_H95A2_T97-019 (testset) | not.recurred | 0.97708 | 0.02292 | not.recurred |
| 0029_1431_H95A2_T97-043 (testset) | not.recurred | 0.94751 | 0.05249 | not.recurred |
| 0029_1434_H95A2_T97-071 (testset) | not.recurred | 0.82107 | 0.17893 | not.recurred |
| 0029_1435_H95A2_T97-0075 (testset) | not.recurred | 0.93485 | 0.06515 | not.recurred |
| 0029_1436_H95A2_T97-0080 (testset) | not.recurred | 0.89367 | 0.10633 | not.recurred |
| 0029_1437_H95A2_T97-0090 (testset) | not.recurred | 0.96494 | 0.03506 | not.recurred |
| 0029_1438_H95A2_T97-0094 (testset) | not.recurred | 0.97556 | 0.02444 | not.recurred |
| 0029_1455_H95A2_T97-191 (testset) | not.recurred | 0.91913 | 0.08087 | not.recurred |
| 0029_1457_H95A2_T97-281 (testset) | not.recurred | 0.92885 | 0.07115 | not.recurred |
| 0029_1461_H95A2_T92-37 (testset) | not.recurred | 0.89845 | 0.10155 | not.recurred |
| 0029_1464_H95A2_T92-58 (testset) | not.recurred | 0.90298 | 0.09702 | not.recurred |
| 0029_1469_H95A2_T94-71 (testset) | not.recurred | 0.86859 | 0.13141 | not.recurred |
| 0029_1470_H95A2_T94-72 (testset) | not.recurred | 0.40381 | 0.59619 | recurred |
| 0029_1471_H95A2_T94-74 (testset) | not.recurred | 0.42168 | 0.57832 | recurred |
| 0029_1473_H95A2_T95-28 (testset) | not.recurred | 0.87566 | 0.12434 | not.recurred |
| 0029_1474_H95A2_T95-31 (testset) | not.recurred | 0.96228 | 0.03772 | not.recurred |
| 0029_1475_H95A2_T95-40 (testset) | not.recurred | 0.77745 | 0.22255 | not.recurred |
| 0029_1476_H95A2_T95-74 (testset) | not.recurred | 0.70197 | 0.29803 | not.recurred |
| 0029_1479_H95A2_T95-162 (testset) | not.recurred | 0.89001 | 0.10999 | not.recurred |
| 0029_1481_H95A2_T95-194 (testset) | not.recurred | 0.79624 | 0.20376 | not.recurred |
| 0029_1482_H95A2_T96-85 (testset) | not.recurred | 0.81648 | 0.18352 | not.recurred |
| 0029_1483_H95A2_T96-94 (testset) | not.recurred | 0.8316 | 0.1684 | not.recurred |
| 0029_1485_H95A2_T96-136 (testset) | not.recurred | 0.91134 | 0.08866 | not.recurred |
| 0029_1486_H95A2_T93-2 (testset) | not.recurred | 0.97475 | 0.02525 | not.recurred |