GO:0006812


GO:0006812

cation transport
(annotated genes)

Biological
Process

Parent node

This leaf node contains 107 genes

The following 55 of these are used in classification:

 SymbolGenenamenot.recurred scorerecurred score
36482_s_atATP2A3 ATPase, Ca++ transporting, ubiquitous-0.16480.3112
33088_atKCNH1 potassium voltage-gated channel, subfamily H (eag-related), member 1-0.16070.3035
182_atITPR3 inositol 1,4,5-triphosphate receptor, type 3-0.160.3022
40737_atKCNMA1 potassium large conductance calcium-activated channel, subfamily M, alpha member 10.1464-0.2765
33626_atCACNA1E calcium channel, voltage-dependent, alpha 1E subunit0.1425-0.2693
37990_atRYR1 ryanodine receptor 1 (skeletal)-0.13670.2581
37343_atITPR3 inositol 1,4,5-triphosphate receptor, type 3-0.13550.256
37415_atATP10B ATPase, Class V, type 10B0.1313-0.2481
31753_atVGCNL1 voltage gated channel like 1-0.1310.2475
39848_atKCNS1 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1-0.12860.2429
32344_r_atKCNA4 potassium voltage-gated channel, shaker-related subfamily, member 4-0.12110.2288
40913_atATP2B4 ATPase, Ca++ transporting, plasma membrane 4-0.11750.2219
32456_s_atATP2B3 ATPase, Ca++ transporting, plasma membrane 3-0.11310.2137
37134_f_atGRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1-0.11250.2124
34520_atHCN2 hyperpolarization activated cyclic nucleotide-gated potassium channel 2-0.0910.172
37135_f_atGRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1-0.090.1699
41052_s_atCACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit-0.08020.1516
32077_s_atKCNQ1 potassium voltage-gated channel, KQT-like subfamily, member 1-0.07920.1495
36013_atSLC30A9 solute carrier family 30 (zinc transporter), member 9-0.07420.1401
40021_atKCND1 potassium voltage-gated channel, Shal-related subfamily, member 10.0731-0.1382
34759_atSLC30A1 solute carrier family 30 (zinc transporter), member 10.0687-0.1298
36806_atTRPV6 transient receptor potential cation channel, subfamily V, member 6-0.05940.1122
34981_atKCNA5 potassium voltage-gated channel, shaker-related subfamily, member 50.0589-0.1112
41563_atTRPM1 transient receptor potential cation channel, subfamily M, member 10.0552-0.1043
41589_atKCNQ2 potassium voltage-gated channel, KQT-like subfamily, member 20.0535-0.1011
41564_atTRPM1 transient receptor potential cation channel, subfamily M, member 1-0.05330.1007
37053_atATP2B2 ATPase, Ca++ transporting, plasma membrane 20.0515-0.0973
37440_atSLC30A4 solute carrier family 30 (zinc transporter), member 40.0434-0.0821
41089_atATP2B4 ATPase, Ca++ transporting, plasma membrane 40.041-0.0774
38002_s_atCACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit-0.04060.0766
33267_atATP8A1 ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1-0.0390.0736
35831_atATP9A ATPase, Class II, type 9A-0.03610.0682
31341_atKCNC3 potassium voltage-gated channel, Shaw-related subfamily, member 30.0324-0.0611
33587_f_atKCND3 potassium voltage-gated channel, Shal-related subfamily, member 30.0321-0.0606
37529_atCACNA1H calcium channel, voltage-dependent, alpha 1H subunit-0.03190.0602
40298_atKIAA0703 KIAA0703 gene product-0.02940.0556
37661_atATP2B1 ATPase, Ca++ transporting, plasma membrane 1-0.02810.053
33622_atCACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit0.026-0.049
39469_s_atATP8A2 ATPase, aminophospholipid transporter-like, Class I, type 8A, member 20.025-0.0473
39275_atCACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit-0.02430.0458
41769_atATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1-0.02270.0428
38858_atKCNH2 potassium voltage-gated channel, subfamily H (eag-related), member 20.0222-0.0419
39877_atKCNC4 potassium voltage-gated channel, Shaw-related subfamily, member 40.0211-0.0399
34170_s_atPKD2 polycystic kidney disease 2 (autosomal dominant)-0.01980.0375
39124_r_atTRPC1 transient receptor potential cation channel, subfamily C, member 1-0.01760.0333
33087_s_atKCNH1 potassium voltage-gated channel, subfamily H (eag-related), member 1-0.01430.0271
36339_atKCNV2 potassium channel, subfamily V, member 20.0134-0.0253
33625_g_atCACNA1E calcium channel, voltage-dependent, alpha 1E subunit-0.01170.0222
41090_s_atATP2B2 ATPase, Ca++ transporting, plasma membrane 2-0.01130.0213
36441_atKCNMA1 potassium large conductance calcium-activated channel, subfamily M, alpha member 10.0103-0.0195
32473_atKCNA6 potassium voltage-gated channel, shaker-related subfamily, member 60.0098-0.0185
36635_atATP11B ATPase, Class VI, type 11B-0.0070.0133
41028_atRYR3 ryanodine receptor 30.006-0.0113
37498_atKCNG1 potassium voltage-gated channel, subfamily G, member 1-0.00490.0093
36306_atKCNQ3 potassium voltage-gated channel, KQT-like subfamily, member 30.0022-0.0042

Performance on training data

 SensitivitySpecificity
not.recurred0.941180.77778
recurred0.777780.94118

Performance on test data

 SensitivitySpecificity
not.recurred0.941180.77778
recurred0.777780.94118

Predictions

 Classnot.recurredrecurredPredictionn
0029_1222_H95A2_KF0146 (testset)recurred0.259650.74035 recurred
0029_1224_HU95A_KF0150 (testset)recurred0.853310.14669 not.recurred
0029_1237_H95A2_KF0125 (testset)not.recurred0.522270.47773 not.recurred
0029_1238_H95A2_KF0128 (testset)recurred0.152380.84762 recurred
0029_1239_H95A2_KF0131 (testset)recurred0.276130.72387 recurred
0029_1240_H95A2_KF0133 (testset)recurred0.113610.88639 recurred
0029_1241_H95A2_KF0142 (testset)recurred0.123470.87653 recurred
0029_1242_H95A2_KF0149 (testset)recurred0.278150.72185 recurred
0029_1243_H95A2_KF0154 (testset)recurred0.017320.98268 recurred
0029_1244_H95A2_KF0153 (testset)recurred0.022990.97701 recurred
0029_1245_H95A2_KF0140 (testset)recurred0.001250.99875 recurred
0029_1246_H95A2_KF0139 (testset)not.recurred0.043340.95666 recurred
0029_1247_H95A2_KF0138 (testset)recurred0.000860.99914 recurred
0029_1248_H95A2_KF0135 (testset)recurred0.002630.99737 recurred
0029_1249_H95A2_KF0134 (testset)recurred0.001520.99848 recurred
0029_1250_H95A2_KF0129 (testset)not.recurred0.94680.0532 not.recurred
0029_1344_H95A2_KF-188 (testset)recurred0.934460.06554 not.recurred
0029_1353_H95A2_KF-176 (testset)recurred0.714430.28557 not.recurred
0029_1355_H95A2_KF-182 (testset)not.recurred0.941310.05869 not.recurred
0029_1357_H95A2_KF-187 (testset)recurred0.623440.37656 not.recurred
0029_1397_H95A2_KF-207 (testset)not.recurred0.556030.44397 not.recurred
0029_1398_H95A2_KF-193 (testset)recurred0.088960.91104 recurred
0029_1399_H95A2_KF-200 (testset)recurred0.014020.98598 recurred
0029_1425_H95A2_T96-159 (testset)not.recurred0.955720.04428 not.recurred
0029_1426_H95A2_T96-167 (testset)not.recurred0.997550.00245 not.recurred
0029_1427_H95A2_T96-195 (testset)not.recurred0.993060.00694 not.recurred
0029_1428_H95A2_T96-250 (testset)not.recurred0.997240.00276 not.recurred
0029_1429_H95A2_T97-017 (testset)not.recurred0.810610.18939 not.recurred
0029_1430_H95A2_T97-019 (testset)not.recurred0.998290.00171 not.recurred
0029_1431_H95A2_T97-043 (testset)not.recurred0.987350.01265 not.recurred
0029_1434_H95A2_T97-071 (testset)not.recurred0.284010.71599 recurred
0029_1435_H95A2_T97-0075 (testset)not.recurred0.993050.00695 not.recurred
0029_1436_H95A2_T97-0080 (testset)not.recurred0.968520.03148 not.recurred
0029_1437_H95A2_T97-0090 (testset)not.recurred0.988760.01124 not.recurred
0029_1438_H95A2_T97-0094 (testset)not.recurred0.997110.00289 not.recurred
0029_1455_H95A2_T97-191 (testset)not.recurred0.971790.02821 not.recurred
0029_1457_H95A2_T97-281 (testset)not.recurred0.961130.03887 not.recurred
0029_1461_H95A2_T92-37 (testset)not.recurred0.986920.01308 not.recurred
0029_1464_H95A2_T92-58 (testset)not.recurred0.883730.11627 not.recurred
0029_1469_H95A2_T94-71 (testset)not.recurred0.935510.06449 not.recurred
0029_1470_H95A2_T94-72 (testset)not.recurred0.693970.30603 not.recurred
0029_1471_H95A2_T94-74 (testset)not.recurred0.698020.30198 not.recurred
0029_1473_H95A2_T95-28 (testset)not.recurred0.835040.16496 not.recurred
0029_1474_H95A2_T95-31 (testset)not.recurred0.993120.00688 not.recurred
0029_1475_H95A2_T95-40 (testset)not.recurred0.932230.06777 not.recurred
0029_1476_H95A2_T95-74 (testset)not.recurred0.809270.19073 not.recurred
0029_1479_H95A2_T95-162 (testset)not.recurred0.966070.03393 not.recurred
0029_1481_H95A2_T95-194 (testset)not.recurred0.79910.2009 not.recurred
0029_1482_H95A2_T96-85 (testset)not.recurred0.955880.04412 not.recurred
0029_1483_H95A2_T96-94 (testset)not.recurred0.921460.07854 not.recurred
0029_1485_H95A2_T96-136 (testset)not.recurred0.949320.05068 not.recurred
0029_1486_H95A2_T93-2 (testset)not.recurred0.99510.0049 not.recurred

 


Generated by StAM on Mon Sep 6 17:56:59 2004