GO:0006811

GO:0006811

ion transport (annotated genes)

Biological Process

Parent node

GO:0006811	ion transport

This leaf node contains 134 genes

The following 45 of these are used in classification:

	Symbol	Genename	not.recurred score	recurred score
41325_at	KCNK3	potassium channel, subfamily K, member 3	0.1305	-0.2465
39313_at	PRKWNK1	protein kinase, lysine deficient 1	-0.13	0.2455
41703_r_at	AKAP7	A kinase (PRKA) anchor protein 7	0.1163	-0.2197
31703_at	CHRNA6	cholinergic receptor, nicotinic, alpha polypeptide 6	-0.104	0.1965
41106_at	KCNN4	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	-0.0947	0.1789
31993_f_at	CACNB2	calcium channel, voltage-dependent, beta 2 subunit	0.0926	-0.1748
38332_at	P2RX4	purinergic receptor P2X, ligand-gated ion channel, 4	-0.0921	0.174
35049_g_at	GRIA3	glutamate receptor, ionotrophic, AMPA 3	-0.0888	0.1676
32988_at	CLCNKA	chloride channel Ka	0.0878	-0.1658
40317_at	ACCN1	amiloride-sensitive cation channel 1, neuronal (degenerin)	0.086	-0.1624
38236_at	GRIN2A	glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0803	-0.1517
36434_r_at	GLRA3	glycine receptor, alpha 3	0.0797	-0.1506
35050_at	GRIA3	glutamate receptor, ionotrophic, AMPA 3	-0.0631	0.1192
38625_g_at	SLC12A4	solute carrier family 12 (potassium/chloride transporters), member 4	-0.0622	0.1174
34614_at	KCNJ9	potassium inwardly-rectifying channel, subfamily J, member 9	-0.0617	0.1166
35028_at	GABRB1	gamma-aminobutyric acid (GABA) A receptor, beta 1	0.0613	-0.1158
36762_at	GABRG2	gamma-aminobutyric acid (GABA) A receptor, gamma 2	0.0613	-0.1158
31567_at	GABRG3	gamma-aminobutyric acid (GABA) A receptor, gamma 3	0.0612	-0.1156
34726_at	CACNB3	calcium channel, voltage-dependent, beta 3 subunit	-0.0568	0.1073
34462_at	SCNN1D	sodium channel, nonvoltage-gated 1, delta	-0.054	0.102
31901_at	KCNAB2	potassium voltage-gated channel, shaker-related subfamily, beta member 2	-0.0512	0.0967
40954_at	FXYD2	FXYD domain containing ion transport regulator 2	-0.0484	0.0914
34200_at	CLCN6	chloride channel 6	-0.0483	0.0912
36285_at	KCNJ4	potassium inwardly-rectifying channel, subfamily J, member 4	0.0477	-0.0901
39521_at	SLC12A4	solute carrier family 12 (potassium/chloride transporters), member 4	-0.0439	0.083
38516_at	SCN1B	sodium channel, voltage-gated, type I, beta	-0.043	0.0813
41688_at	TM4SF11	transmembrane 4 superfamily member 11 (plasmolipin)	0.0409	-0.0772
38069_at	CLCN7	chloride channel 7	-0.0335	0.0633
33568_at	CHRNB4	cholinergic receptor, nicotinic, beta polypeptide 4	0.0313	-0.0591
41776_at	ATOX1	ATX1 antioxidant protein 1 homolog (yeast)	-0.0266	0.0502
33552_at	SLCO1A2	solute carrier organic anion transporter family, member 1A2	0.0254	-0.0479
37051_at	KCNN3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	-0.0233	0.0441
36855_r_at	GRIA1	glutamate receptor, ionotropic, AMPA 1	-0.018	0.0341
41538_r_at	GRIN2C	glutamate receptor, ionotropic, N-methyl D-aspartate 2C	-0.018	0.0339
39682_at	SCNN1B	sodium channel, nonvoltage-gated 1, beta (Liddle syndrome)	-0.0153	0.0289
34428_at	KCNJ8	potassium inwardly-rectifying channel, subfamily J, member 8	-0.0139	0.0263
37435_s_at	KCNJ6	potassium inwardly-rectifying channel, subfamily J, member 6	0.0136	-0.0258
33697_at	P2RX7	purinergic receptor P2X, ligand-gated ion channel, 7	-0.0122	0.023
33891_at	CLIC4	chloride intracellular channel 4	-0.0067	0.0127
37601_at	SLC22A3	solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0055	-0.0104
39566_at	CHRNA7	cholinergic receptor, nicotinic, alpha polypeptide 7	-0.0042	0.0079
34154_at	CHRNB2	cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	-0.0028	0.0053
39573_at	GRIK2	glutamate receptor, ionotropic, kainate 2	0.0028	-0.0053
741_g_at	HTR3A	5-hydroxytryptamine (serotonin) receptor 3A	0.0014	-0.0027
40746_at	GRIA2	glutamate receptor, ionotropic, AMPA 2	0.0012	-0.0022

Performance on training data

• Error rate: 0.13462
• Performance: 0.97896
• Redundancy: 1.49567

	Sensitivity	Specificity
not.recurred	0.91176	0.77778
recurred	0.77778	0.91176

Performance on test data

• Error rate: 0.13462
• Performance: 0.97896
• Redundancy: 1.69311

	Sensitivity	Specificity
not.recurred	0.91176	0.77778
recurred	0.77778	0.91176

Predictions

	Class	not.recurred	recurred	Predictionn
0029_1222_H95A2_KF0146 (testset)	recurred	0.47823	0.52177	recurred
0029_1224_HU95A_KF0150 (testset)	recurred	0.73141	0.26859	not.recurred
0029_1237_H95A2_KF0125 (testset)	not.recurred	0.24332	0.75668	recurred
0029_1238_H95A2_KF0128 (testset)	recurred	0.14901	0.85099	recurred
0029_1239_H95A2_KF0131 (testset)	recurred	0.40445	0.59555	recurred
0029_1240_H95A2_KF0133 (testset)	recurred	0.18406	0.81594	recurred
0029_1241_H95A2_KF0142 (testset)	recurred	0.35096	0.64904	recurred
0029_1242_H95A2_KF0149 (testset)	recurred	0.17726	0.82274	recurred
0029_1243_H95A2_KF0154 (testset)	recurred	0.17597	0.82403	recurred
0029_1244_H95A2_KF0153 (testset)	recurred	0.16677	0.83323	recurred
0029_1245_H95A2_KF0140 (testset)	recurred	0.00496	0.99504	recurred
0029_1246_H95A2_KF0139 (testset)	not.recurred	0.07447	0.92553	recurred
0029_1247_H95A2_KF0138 (testset)	recurred	0.00491	0.99509	recurred
0029_1248_H95A2_KF0135 (testset)	recurred	0.03379	0.96621	recurred
0029_1249_H95A2_KF0134 (testset)	recurred	0.02035	0.97965	recurred
0029_1250_H95A2_KF0129 (testset)	not.recurred	0.93411	0.06589	not.recurred
0029_1344_H95A2_KF-188 (testset)	recurred	0.9087	0.0913	not.recurred
0029_1353_H95A2_KF-176 (testset)	recurred	0.70255	0.29745	not.recurred
0029_1355_H95A2_KF-182 (testset)	not.recurred	0.92433	0.07567	not.recurred
0029_1357_H95A2_KF-187 (testset)	recurred	0.68059	0.31941	not.recurred
0029_1397_H95A2_KF-207 (testset)	not.recurred	0.72123	0.27877	not.recurred
0029_1398_H95A2_KF-193 (testset)	recurred	0.36872	0.63128	recurred
0029_1399_H95A2_KF-200 (testset)	recurred	0.10048	0.89952	recurred
0029_1425_H95A2_T96-159 (testset)	not.recurred	0.92974	0.07026	not.recurred
0029_1426_H95A2_T96-167 (testset)	not.recurred	0.95911	0.04089	not.recurred
0029_1427_H95A2_T96-195 (testset)	not.recurred	0.96872	0.03128	not.recurred
0029_1428_H95A2_T96-250 (testset)	not.recurred	0.90484	0.09516	not.recurred
0029_1429_H95A2_T97-017 (testset)	not.recurred	0.90605	0.09395	not.recurred
0029_1430_H95A2_T97-019 (testset)	not.recurred	0.99495	0.00505	not.recurred
0029_1431_H95A2_T97-043 (testset)	not.recurred	0.9072	0.0928	not.recurred
0029_1434_H95A2_T97-071 (testset)	not.recurred	0.73315	0.26685	not.recurred
0029_1435_H95A2_T97-0075 (testset)	not.recurred	0.97628	0.02372	not.recurred
0029_1436_H95A2_T97-0080 (testset)	not.recurred	0.86386	0.13614	not.recurred
0029_1437_H95A2_T97-0090 (testset)	not.recurred	0.99233	0.00767	not.recurred
0029_1438_H95A2_T97-0094 (testset)	not.recurred	0.9858	0.0142	not.recurred
0029_1455_H95A2_T97-191 (testset)	not.recurred	0.96129	0.03871	not.recurred
0029_1457_H95A2_T97-281 (testset)	not.recurred	0.90725	0.09275	not.recurred
0029_1461_H95A2_T92-37 (testset)	not.recurred	0.95114	0.04886	not.recurred
0029_1464_H95A2_T92-58 (testset)	not.recurred	0.92857	0.07143	not.recurred
0029_1469_H95A2_T94-71 (testset)	not.recurred	0.78871	0.21129	not.recurred
0029_1470_H95A2_T94-72 (testset)	not.recurred	0.56573	0.43427	not.recurred
0029_1471_H95A2_T94-74 (testset)	not.recurred	0.75509	0.24491	not.recurred
0029_1473_H95A2_T95-28 (testset)	not.recurred	0.67413	0.32587	not.recurred
0029_1474_H95A2_T95-31 (testset)	not.recurred	0.96758	0.03242	not.recurred
0029_1475_H95A2_T95-40 (testset)	not.recurred	0.63443	0.36557	not.recurred
0029_1476_H95A2_T95-74 (testset)	not.recurred	0.45103	0.54897	recurred
0029_1479_H95A2_T95-162 (testset)	not.recurred	0.91352	0.08648	not.recurred
0029_1481_H95A2_T95-194 (testset)	not.recurred	0.61595	0.38405	not.recurred
0029_1482_H95A2_T96-85 (testset)	not.recurred	0.86567	0.13433	not.recurred
0029_1483_H95A2_T96-94 (testset)	not.recurred	0.84004	0.15996	not.recurred
0029_1485_H95A2_T96-136 (testset)	not.recurred	0.89076	0.10924	not.recurred
0029_1486_H95A2_T93-2 (testset)	not.recurred	0.95336	0.04664	not.recurred