GO:0007267


GO:0007267

cell-cell signaling
(annotated genes)

Biological
Process

Parent node

This leaf node contains 331 genes

The following 66 of these are used in classification:

 SymbolGenenamenot.recurred scorerecurred score
38115_atTUSC2 tumor suppressor candidate 2-0.19330.3706
36958_atZYX zyxin-0.15090.2892
218_atIK IK cytokine, down-regulator of HLA II-0.14690.2816
39061_atBST2 bone marrow stromal cell antigen 2-0.13230.2535
38046_atIK IK cytokine, down-regulator of HLA II-0.12230.2344
1526_i_atFGF8 fibroblast growth factor 8 (androgen-induced)0.1035-0.1985
41726_atECE1 endothelin converting enzyme 1-0.09280.178
36754_atADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary)0.0925-0.1773
41134_atDAP4 disks large-associated protein 4-0.08610.1651
2091_atWNT4 wingless-type MMTV integration site family, member 4-0.08610.165
38487_atSTAB1 stabilin 1-0.0820.1571
36879_atECGF1 endothelial cell growth factor 1 (platelet-derived)-0.07590.1454
38545_atINHBB inhibin, beta B (activin AB beta polypeptide)-0.07340.1406
36450_atPYY peptide YY0.0728-0.1395
36061_atSEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A-0.06380.1223
40388_atDLGAP1 discs, large (Drosophila) homolog-associated protein 10.0603-0.1156
36784_atCSH1 chorionic somatomammotropin hormone 1 (placental lactogen)0.0557-0.1067
35091_atNRG2 neuregulin 20.0521-0.0998
32114_s_atADORA2A adenosine A2a receptor-0.05040.0966
41584_atNUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3-0.04970.0953
1525_s_atFGF8 fibroblast growth factor 8 (androgen-induced)-0.04770.0913
33567_atVIP vasoactive intestinal peptide0.0466-0.0893
37989_atPTHLH parathyroid hormone-like hormone-0.04570.0876
31716_atPCDH1 protocadherin 1 (cadherin-like 1)0.0445-0.0854
1830_s_atTGFB1 transforming growth factor, beta 1 (Camurati-Engelmann disease)-0.03950.0756
32358_atWISP3 WNT1 inducible signaling pathway protein 3-0.03940.0755
725_i_atCSH1 chorionic somatomammotropin hormone 1 (placental lactogen)0.0388-0.0744
35703_atPDGFA platelet-derived growth factor alpha polypeptide-0.03780.0724
565_atSRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)-0.03650.0699
33855_atGRB2 growth factor receptor-bound protein 2-0.03370.0647
1578_g_atAR androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)-0.03280.0629
1665_s_atECGF1 endothelial cell growth factor 1 (platelet-derived)-0.03270.0627
37796_atEPO erythropoietin-0.03060.0587
35089_atNRG2 neuregulin 20.03-0.0576
37615_atGRB10 growth factor receptor-bound protein 10-0.02790.0535
34020_atAVP arginine vasopressin (neurophysin II, antidiuretic hormone, diabetes insipidus, neurohypophyseal)-0.02780.0533
32137_atJAG2 jagged 2-0.0270.0518
31663_atMLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4-0.02390.0458
39402_atIL1B interleukin 1, beta0.0227-0.0436
41198_atGRN granulin-0.02190.042
37823_atCCL8 chemokine (C-C motif) ligand 80.0216-0.0415
35536_atECE2 endothelin converting enzyme 20.0211-0.0405
36296_atLTA lymphotoxin alpha (TNF superfamily, member 1)-0.02020.0388
1565_s_atGRB2 growth factor receptor-bound protein 2-0.01970.0377
40425_atEFNA1 ephrin-A1-0.01940.0372
33565_atTSHB thyroid stimulating hormone, beta0.0173-0.0332
1359_atIL17 interleukin 17 (cytotoxic T-lymphocyte-associated serine esterase 8)0.0153-0.0293
41032_atPCSK5 proprotein convertase subtilisin/kexin type 50.0141-0.027
41105_s_atMLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4-0.01330.0256
32115_r_atADORA2A adenosine A2a receptor-0.0130.025
35084_atAMH anti-Mullerian hormone-0.01260.0241
34573_atEFNA3 ephrin-A30.0116-0.0223
34625_atLALBA lactalbumin, alpha-0.0116-0.0222
41289_atNCAM1 neural cell adhesion molecule 10.011-0.0211
1107_s_atG1P2 interferon, alpha-inducible protein (clone IFI-15K)-0.01080.0206
41630_atIL7 interleukin 70.0092-0.0176
790_atNGFB nerve growth factor, beta polypeptide0.0083-0.0159
996_atFGF1 fibroblast growth factor 1 (acidic)-0.00810.0154
33169_atNEO1 neogenin homolog 1 (chicken)-0.00540.0104
293_atINSL3 insulin-like 3 (Leydig cell)0.0052-0.01
441_s_atLIF leukemia inhibitory factor (cholinergic differentiation factor)0.0044-0.0084
32319_atTNFSF4 tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa)0.0032-0.0062
31495_atXCL2 chemokine (C motif) ligand 20.0032-0.0061
34335_atEFNB2 ephrin-B2-0.00230.0043
40008_atCCL11 chemokine (C-C motif) ligand 118e-04-0.0016
1858_atTNFSF6 tumor necrosis factor (ligand) superfamily, member 65e-04-9e-04

Performance on training data

 SensitivitySpecificity
not.recurred0.956520.75
recurred0.750.95652

Performance on test data

 SensitivitySpecificity
not.recurred0.909090.66667
recurred0.666670.90909

Predictions

 Classnot.recurredrecurredPredictionn
0029_1222_H95A2_KF0146 (testset)recurred0.258680.74132 recurred
0029_1224_HU95A_KF0150recurred0.046340.95366 recurred
0029_1237_H95A2_KF0125not.recurred0.386030.61397 recurred
0029_1238_H95A2_KF0128recurred0.112330.88767 recurred
0029_1239_H95A2_KF0131recurred0.200470.79953 recurred
0029_1240_H95A2_KF0133recurred0.003120.99688 recurred
0029_1241_H95A2_KF0142recurred0.803340.19666 not.recurred
0029_1242_H95A2_KF0149 (testset)recurred0.140880.85912 recurred
0029_1243_H95A2_KF0154recurred0.007390.99261 recurred
0029_1244_H95A2_KF0153 (testset)recurred0.055760.94424 recurred
0029_1245_H95A2_KF0140 (testset)recurred0.000860.99914 recurred
0029_1246_H95A2_KF0139 (testset)not.recurred0.007360.99264 recurred
0029_1247_H95A2_KF0138recurred0.001280.99872 recurred
0029_1248_H95A2_KF0135recurred0.032810.96719 recurred
0029_1249_H95A2_KF0134recurred0.002240.99776 recurred
0029_1250_H95A2_KF0129not.recurred0.922320.07768 not.recurred
0029_1344_H95A2_KF-188recurred0.407350.59265 recurred
0029_1353_H95A2_KF-176recurred0.892180.10782 not.recurred
0029_1355_H95A2_KF-182 (testset)not.recurred0.683210.31679 not.recurred
0029_1357_H95A2_KF-187recurred0.637920.36208 not.recurred
0029_1397_H95A2_KF-207not.recurred0.814850.18515 not.recurred
0029_1398_H95A2_KF-193 (testset)recurred0.923020.07698 not.recurred
0029_1399_H95A2_KF-200 (testset)recurred0.97490.0251 not.recurred
0029_1425_H95A2_T96-159 (testset)not.recurred0.55890.4411 not.recurred
0029_1426_H95A2_T96-167 (testset)not.recurred0.722640.27736 not.recurred
0029_1427_H95A2_T96-195not.recurred0.926050.07395 not.recurred
0029_1428_H95A2_T96-250not.recurred0.890840.10916 not.recurred
0029_1429_H95A2_T97-017 (testset)not.recurred0.938140.06186 not.recurred
0029_1430_H95A2_T97-019 (testset)not.recurred0.995110.00489 not.recurred
0029_1431_H95A2_T97-043 (testset)not.recurred0.806070.19393 not.recurred
0029_1434_H95A2_T97-071not.recurred0.638180.36182 not.recurred
0029_1435_H95A2_T97-0075not.recurred0.978850.02115 not.recurred
0029_1436_H95A2_T97-0080 (testset)not.recurred0.556110.44389 not.recurred
0029_1437_H95A2_T97-0090 (testset)not.recurred0.951760.04824 not.recurred
0029_1438_H95A2_T97-0094not.recurred0.982270.01773 not.recurred
0029_1455_H95A2_T97-191not.recurred0.99440.0056 not.recurred
0029_1457_H95A2_T97-281 (testset)not.recurred0.851310.14869 not.recurred
0029_1461_H95A2_T92-37not.recurred0.985360.01464 not.recurred
0029_1464_H95A2_T92-58not.recurred0.951530.04847 not.recurred
0029_1469_H95A2_T94-71not.recurred0.969440.03056 not.recurred
0029_1470_H95A2_T94-72not.recurred0.949090.05091 not.recurred
0029_1471_H95A2_T94-74not.recurred0.971110.02889 not.recurred
0029_1473_H95A2_T95-28not.recurred0.901880.09812 not.recurred
0029_1474_H95A2_T95-31not.recurred0.97070.0293 not.recurred
0029_1475_H95A2_T95-40not.recurred0.689080.31092 not.recurred
0029_1476_H95A2_T95-74not.recurred0.847120.15288 not.recurred
0029_1479_H95A2_T95-162not.recurred0.985720.01428 not.recurred
0029_1481_H95A2_T95-194not.recurred0.947050.05295 not.recurred
0029_1482_H95A2_T96-85 (testset)not.recurred0.857830.14217 not.recurred
0029_1483_H95A2_T96-94not.recurred0.636350.36365 not.recurred
0029_1485_H95A2_T96-136not.recurred0.965560.03444 not.recurred
0029_1486_H95A2_T93-2not.recurred0.9930.007 not.recurred

 


Generated by StAM on Mon Sep 6 17:56:31 2004