readImageFiles {arrayMagic} | R Documentation |
All image analysis files are expected to correspond to the same type of microarray.
fileNames |
vector of character strings; default missing |
spotAnnoColumns |
vector of character strings; the column names of the image analysis data file, which are common to all microarrays; default missing |
dataColumns |
named vector of character strings; the column names of the image analysis data file, which contain the raw intensities values of each spot; if supplied names(dataColumns) must contain: c("Cy3","Cy3Background","Cy5","Cy5Background"); default missing |
type |
character string; possible values: "GenePix" and "ScanAlyze"; default: "GenePix" |
verbose |
logical; default TRUE |
object of class arrayData
Andreas Buness <a.buness@dkfz.de>